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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL12814.1Hypothetical protein. (287 aa)    
Predicted Functional Partners:
SCL12812.1
Hypothetical protein.
       0.791
SCL12810.1
Single-strand DNA-binding protein.
     
 0.780
SCL12815.1
Hypothetical protein.
       0.773
SCL12817.1
Hypothetical protein.
       0.773
SCL12819.1
Hypothetical protein.
       0.773
SCL12820.1
Hypothetical protein.
       0.773
SCL13400.1
ATP-dependent DNA helicase, Rep family.
  
 
 0.748
SCL13430.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily.
  
 
 0.727
SCL13432.1
Superfamily I DNA or RNA helicase; Belongs to the helicase family. UvrD subfamily.
  
 
 0.727
SCL12886.1
Protein of unknown function.
  
 
 0.683
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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