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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL12955.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (321 aa)    
Predicted Functional Partners:
SCL12953.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.998
SCL14638.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.985
SCL19589.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.985
SCL17238.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.981
SCL14364.1
Cellobiose transport system permease protein.
 
 0.935
SCL24565.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.928
SCL14242.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.917
SCL24534.1
N-acetylglucosamine transport system permease protein.
 
 0.915
SCL25787.1
Sn-glycerol 3-phosphate transport system permease protein.
 
 0.911
SCL28364.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.895
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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