Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SCL13231.1WGR domain-containing protein, predicted DNA-binding domain in MolR. (473 aa)    
Predicted Functional Partners:
SCL17083.1
Peptidylprolyl isomerase.
   
   0.649
SCL27596.1
Peptidylprolyl isomerase.
   
   0.649
SCL28948.1
Surfactin synthase thioesterase subunit.
  
     0.616
SCL13230.1
Streptomycin 6-kinase.
 
     0.589
SCL26072.1
Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family.
 
    0.486
SCL29743.1
FR47-like protein.
  
    0.480
SCL16220.1
Hypothetical protein.
  
     0.462
SCL13228.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
    0.456
SCL16267.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
  0.450
mqnB
Futalosine hydrolase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).
     
  0.450
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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