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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL13231.1WGR domain-containing protein, predicted DNA-binding domain in MolR. (473 aa)    
Predicted Functional Partners:
SCL28948.1
Surfactin synthase thioesterase subunit.
  
     0.616
SCL13230.1
Streptomycin 6-kinase.
 
     0.590
SCL29743.1
FR47-like protein.
  
    0.481
SCL32113.1
RIP metalloprotease RseP.
   
  
 0.473
SCL26072.1
Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family.
 
    0.471
SCL16220.1
Hypothetical protein.
  
     0.462
SCL13228.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
    0.450
SCL13225.1
Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
       0.444
SCL16253.1
Winged helix-turn helix.
  
     0.433
SCL26065.1
Hypothetical protein.
  
     0.422
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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