Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL13329.1 | SCL13331.1 | GA0074694_0270 | GA0074694_0271 | Hypothetical protein. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.956 |
SCL13329.1 | cysH | GA0074694_0270 | GA0074694_0269 | Hypothetical protein. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.972 |
SCL13331.1 | SCL13329.1 | GA0074694_0271 | GA0074694_0270 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Hypothetical protein. | 0.956 |
SCL13331.1 | SCL13621.1 | GA0074694_0271 | GA0074694_0413 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Sulfate adenylyltransferase. | 0.980 |
SCL13331.1 | SCL18294.1 | GA0074694_0271 | GA0074694_2303 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Sulfate adenylyltransferase subunit 2. | 0.912 |
SCL13331.1 | SCL18298.1 | GA0074694_0271 | GA0074694_2304 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Bifunctional enzyme CysN/CysC; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.892 |
SCL13331.1 | SCL18501.1 | GA0074694_0271 | GA0074694_2376 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Sulfate adenylyltransferase subunit 2. | 0.913 |
SCL13331.1 | SCL18505.1 | GA0074694_0271 | GA0074694_2377 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Sulfate adenylyltransferase subunit 1. | 0.892 |
SCL13331.1 | SCL21836.1 | GA0074694_0271 | GA0074694_3163 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | uroporphyrinogen-III C-methyltransferase. | 0.971 |
SCL13331.1 | SCL22526.1 | GA0074694_0271 | GA0074694_3385 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | FMN reductase. | 0.898 |
SCL13331.1 | SCL31679.1 | GA0074694_0271 | GA0074694_6050 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.894 |
SCL13331.1 | cysH | GA0074694_0271 | GA0074694_0269 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.999 |
SCL13621.1 | SCL13331.1 | GA0074694_0413 | GA0074694_0271 | Sulfate adenylyltransferase. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.980 |
SCL13621.1 | SCL18294.1 | GA0074694_0413 | GA0074694_2303 | Sulfate adenylyltransferase. | Sulfate adenylyltransferase subunit 2. | 0.999 |
SCL13621.1 | SCL18298.1 | GA0074694_0413 | GA0074694_2304 | Sulfate adenylyltransferase. | Bifunctional enzyme CysN/CysC; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.998 |
SCL13621.1 | SCL18501.1 | GA0074694_0413 | GA0074694_2376 | Sulfate adenylyltransferase. | Sulfate adenylyltransferase subunit 2. | 0.999 |
SCL13621.1 | SCL18505.1 | GA0074694_0413 | GA0074694_2377 | Sulfate adenylyltransferase. | Sulfate adenylyltransferase subunit 1. | 0.996 |
SCL13621.1 | SCL21836.1 | GA0074694_0413 | GA0074694_3163 | Sulfate adenylyltransferase. | uroporphyrinogen-III C-methyltransferase. | 0.992 |
SCL13621.1 | SCL31679.1 | GA0074694_0413 | GA0074694_6050 | Sulfate adenylyltransferase. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.526 |
SCL13621.1 | cysH | GA0074694_0413 | GA0074694_0269 | Sulfate adenylyltransferase. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.998 |
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