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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL13505.1GntR family transcriptional regulator. (135 aa)    
Predicted Functional Partners:
SCL24886.1
Transcriptional regulator, GntR family.
  
     0.770
SCL26560.1
GntR family transcriptional regulator.
  
     0.769
SCL27727.1
Transcriptional regulator, GntR family.
  
     0.764
SCL28967.1
Transcriptional regulator, GntR family.
  
     0.764
SCL16881.1
GntR family transcriptional regulator.
  
     0.736
SCL13716.1
Transcriptional regulator, GntR family.
  
     0.728
SCL19424.1
Regulatory protein, gntR family.
  
     0.702
SCL16250.1
Transcriptional regulator, GntR family.
  
     0.696
SCL30601.1
Regulatory protein, gntR family.
  
    0.628
SCL14181.1
Regulatory protein, gntR family.
  
     0.573
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.