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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL13713.1Quinol monooxygenase YgiN. (103 aa)    
Predicted Functional Partners:
SCL13720.1
Transglutaminase-like superfamily protein.
 
   
 0.923
SCL13711.1
Predicted arabinose efflux permease, MFS family.
 
     0.815
SCL13717.1
Probable F420-dependent oxidoreductase, Rv2161c family.
 
   
 0.754
SCL13716.1
Transcriptional regulator, GntR family.
 
  
 0.709
SCL28641.1
Uncharacterized conserved protein, DUF2267 family.
  
     0.485
SCL13723.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase.
 
     0.429
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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