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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL14135.1Protein of unknown function. (251 aa)    
Predicted Functional Partners:
SCL14132.1
Adenylyltransferase and sulfurtransferase.
       0.576
SCL14137.1
Protein of unknown function.
 
    
0.519
SCL14140.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.499
SCL14142.1
Hypothetical protein.
       0.486
SCL16076.1
DinB superfamily protein.
  
  
  0.473
SCL28666.1
Mannose-6-phosphate isomerase, cupin superfamily.
  
     0.461
SCL23757.1
Protein of unknown function.
  
     0.456
SCL17755.1
AAA domain-containing protein.
  
     0.455
SCL14109.1
Uncharacterized conserved protein, DUF2252 family.
  
     0.427
SCL17757.1
Helix-turn-helix domain-containing protein.
  
     0.424
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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