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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL14309.1DNA binding domain-containing protein, excisionase family. (69 aa)    
Predicted Functional Partners:
SCL23810.1
Glutamate synthase (NADH) large subunit.
    
  0.751
SCL18177.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.698
SCL18772.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
  
    0.514
SCL14302.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.460
SCL14305.1
UDP-glucose 4-epimerase.
       0.460
SCL18768.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
  
    0.451
SCL22721.1
Protein of unknown function.
  
     0.439
SCL14313.1
Hypothetical protein.
       0.428
SCL14306.1
Protein of unknown function.
       0.410
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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