STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL14397.1Helix-turn-helix. (241 aa)    
Predicted Functional Partners:
SCL14394.1
Hypothetical protein.
       0.773
SCL14390.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.745
SCL13395.1
Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family.
  
     0.732
SCL23351.1
Polyketide cyclase / dehydrase and lipid transport.
  
     0.732
SCL14393.1
Protein of unknown function.
 
     0.684
SCL14905.1
Anion-transporting ATPase, ArsA/GET3 family.
  
     0.652
SCL14305.1
UDP-glucose 4-epimerase.
  
     0.573
SCL15804.1
Acetyltransferase (GNAT) family protein.
  
     0.572
SCL14906.1
Anion-transporting ATPase, ArsA/GET3 family.
  
     0.567
SCL14302.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.565
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.