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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL14406.1Hypothetical protein; Belongs to the GcvT family. (372 aa)    
Predicted Functional Partners:
SCL14408.1
Nickel uptake regulator, Fur family; Belongs to the Fur family.
       0.885
SCL14404.1
Uncharacterized conserved protein, DUF849 family.
       0.836
SCL14401.1
L-asparaginase II.
       0.718
SCL22721.1
Protein of unknown function.
  
     0.671
SCL14411.1
4-amino-4-deoxychorismate lyase.
       0.659
SCL23225.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
 
 
 0.659
SCL21836.1
uroporphyrinogen-III C-methyltransferase.
     
 0.551
SCL31468.1
Protein of unknown function.
  
     0.539
SCL19585.1
Fe-S cluster assembly iron-binding protein IscA.
  
 
 0.512
SCL23642.1
YggT family protein.
  
     0.488
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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