STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL14467.1NUDIX domain-containing protein. (277 aa)    
Predicted Functional Partners:
SCL14892.1
Glyoxylase, beta-lactamase superfamily II.
     0.955
SCL14132.1
Adenylyltransferase and sulfurtransferase.
  
 0.771
SCL27811.1
Acyl carrier protein.
   
 0.712
SCL30334.1
Acyl transferase domain-containing protein.
  
 
 0.587
SCL17020.1
Acyl transferase domain-containing protein.
   
 
 0.586
SCL14906.1
Anion-transporting ATPase, ArsA/GET3 family.
 
     0.548
SCL14470.1
Predicted dehydrogenase.
  
    0.538
SCL28411.1
Cysteine synthase.
  
 0.529
SCL31021.1
Amino acid adenylation domain-containing protein.
   
 
 0.508
SCL18262.1
Acyl transferase domain-containing protein.
   
 
 0.506
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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