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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL14498.1Glycolate oxidase. (483 aa)    
Predicted Functional Partners:
SCL16655.1
Glycolate oxidase FAD binding subunit.
  
  
 
0.916
SCL15441.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.902
SCL23284.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
    
  0.830
SCL27448.1
L-lactate dehydrogenase (cytochrome).
  
 0.824
SCL23810.1
Glutamate synthase (NADH) large subunit.
    
 0.800
SCL26038.1
Isocitrate lyase.
     
 0.800
SCL17128.1
Phosphoglycolate phosphatase.
    
  0.764
SCL16539.1
Malate synthase.
  
 
 0.719
SCL26042.1
Malate synthase; Belongs to the malate synthase family.
  
 
 0.719
SCL14718.1
4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
    
 0.716
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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