STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL14576.1Protein N-acetyltransferase, RimJ/RimL family. (169 aa)    
Predicted Functional Partners:
SCL13128.1
Hypothetical protein; Manually curated.
  
     0.710
SCL19122.1
Hypothetical protein.
  
    0.690
SCL13298.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.677
SCL27393.1
SCP-2 sterol transfer family protein.
  
     0.640
SCL16744.1
Beta-lactamase enzyme family protein.
  
     0.639
SCL28766.1
Sulfatase.
  
    0.630
SCL23810.1
Glutamate synthase (NADH) large subunit.
   
 
  0.626
SCL16286.1
Carboxypeptidase regulatory-like domain-containing protein.
  
     0.618
SCL30737.1
4-amino-4-deoxy-L-arabinose transferase.
  
     0.609
SCL18177.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.601
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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