Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL14671.1 | SCL14691.1 | GA0074694_0867 | GA0074694_0875 | 4-hydroxyphenylpyruvate dioxygenase. | Fumarylacetoacetate hydrolase. | 0.923 |
SCL14671.1 | SCL14694.1 | GA0074694_0867 | GA0074694_0876 | 4-hydroxyphenylpyruvate dioxygenase. | Hypothetical protein. | 0.608 |
SCL14671.1 | SCL14697.1 | GA0074694_0867 | GA0074694_0877 | 4-hydroxyphenylpyruvate dioxygenase. | Homogentisate 1,2-dioxygenase. | 0.998 |
SCL14691.1 | SCL14671.1 | GA0074694_0875 | GA0074694_0867 | Fumarylacetoacetate hydrolase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.923 |
SCL14691.1 | SCL14694.1 | GA0074694_0875 | GA0074694_0876 | Fumarylacetoacetate hydrolase. | Hypothetical protein. | 0.946 |
SCL14691.1 | SCL14697.1 | GA0074694_0875 | GA0074694_0877 | Fumarylacetoacetate hydrolase. | Homogentisate 1,2-dioxygenase. | 0.981 |
SCL14694.1 | SCL14671.1 | GA0074694_0876 | GA0074694_0867 | Hypothetical protein. | 4-hydroxyphenylpyruvate dioxygenase. | 0.608 |
SCL14694.1 | SCL14691.1 | GA0074694_0876 | GA0074694_0875 | Hypothetical protein. | Fumarylacetoacetate hydrolase. | 0.946 |
SCL14694.1 | SCL14697.1 | GA0074694_0876 | GA0074694_0877 | Hypothetical protein. | Homogentisate 1,2-dioxygenase. | 0.906 |
SCL14694.1 | SCL26791.1 | GA0074694_0876 | GA0074694_4622 | Hypothetical protein. | Selenocysteine-specific elongation factor. | 0.865 |
SCL14694.1 | SCL27231.1 | GA0074694_0876 | GA0074694_4751 | Hypothetical protein. | Conserved hypothetical protein. | 0.615 |
SCL14694.1 | alaS | GA0074694_0876 | GA0074694_5483 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.638 |
SCL14694.1 | aspS-2 | GA0074694_0876 | GA0074694_5510 | Hypothetical protein. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.852 |
SCL14694.1 | hisG | GA0074694_0876 | GA0074694_5438 | Hypothetical protein. | ATP phosphoribosyltransferase (homohexameric); Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily. | 0.969 |
SCL14694.1 | ispG | GA0074694_0876 | GA0074694_6170 | Hypothetical protein. | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.622 |
SCL14694.1 | pheT | GA0074694_0876 | GA0074694_5430 | Hypothetical protein. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.615 |
SCL14697.1 | SCL14671.1 | GA0074694_0877 | GA0074694_0867 | Homogentisate 1,2-dioxygenase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.998 |
SCL14697.1 | SCL14691.1 | GA0074694_0877 | GA0074694_0875 | Homogentisate 1,2-dioxygenase. | Fumarylacetoacetate hydrolase. | 0.981 |
SCL14697.1 | SCL14694.1 | GA0074694_0877 | GA0074694_0876 | Homogentisate 1,2-dioxygenase. | Hypothetical protein. | 0.906 |
SCL26791.1 | SCL14694.1 | GA0074694_4622 | GA0074694_0876 | Selenocysteine-specific elongation factor. | Hypothetical protein. | 0.865 |
page 1 of 2