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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL14874.1propionyl-CoA carboxylase alpha chain. (658 aa)    
Predicted Functional Partners:
SCL22763.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.995
SCL14871.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 0.985
SCL16099.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  
 0.985
SCL18750.1
propionyl-CoA carboxylase carboxyltransferase subunit.
 
 0.985
SCL15922.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 0.962
SCL13016.1
methylmalonyl-CoA epimerase.
  
 
 0.952
SCL18754.1
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
 
  
 0.951
SCL25875.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
 
0.947
SCL16069.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
 
 
  0.938
SCL13298.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.903
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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