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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL14878.1Hypothetical protein. (340 aa)    
Predicted Functional Partners:
SCL31757.1
Glutamate transport system permease protein.
  
 0.919
SCL31762.1
Amino acid ABC transporter membrane protein 2, PAAT family.
  
 0.798
SCL14881.1
Glutamate transport system substrate-binding protein.
       0.774
SCL27076.1
GAF domain-containing protein.
    
 0.736
SCL16660.1
Signal transduction histidine kinase.
    
 0.725
SCL13621.1
Sulfate adenylyltransferase.
   
 
 0.649
SCL32073.1
Signal transduction histidine kinase.
    
  0.638
SCL13450.1
Prephenate dehydrogenase.
    
 0.635
pheA
Prephenate dehydratase.
     
 0.611
SCL13664.1
Chorismate mutase.
     
 0.606
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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