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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL14905.1Anion-transporting ATPase, ArsA/GET3 family. (325 aa)    
Predicted Functional Partners:
SCL14906.1
Anion-transporting ATPase, ArsA/GET3 family.
 
 
 
 0.997
pyrF
Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
    
 
 0.877
SCL14348.1
Putative sensory transduction regulator.
  
     0.739
SCL14305.1
UDP-glucose 4-epimerase.
  
     0.727
SCL23351.1
Polyketide cyclase / dehydrase and lipid transport.
 
     0.702
SCL14302.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.694
SCL14902.1
Hypothetical protein.
       0.686
SCL14397.1
Helix-turn-helix.
  
     0.652
SCL16055.1
Hypothetical protein.
  
     0.633
SCL13395.1
Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family.
  
     0.629
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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