Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL14477.1 | SCL15243.1 | GA0074694_0781 | GA0074694_1121 | Polyphosphate:nucleotide phosphotransferase, PPK2 family. | Radical SAM superfamily protein. | 0.497 |
SCL15235.1 | SCL15239.1 | GA0074694_1117 | GA0074694_1119 | L-glutamine:scyllo-inosose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Predicted dehydrogenase. | 0.852 |
SCL15235.1 | SCL15241.1 | GA0074694_1117 | GA0074694_1120 | L-glutamine:scyllo-inosose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.615 |
SCL15235.1 | SCL15243.1 | GA0074694_1117 | GA0074694_1121 | L-glutamine:scyllo-inosose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Radical SAM superfamily protein. | 0.547 |
SCL15235.1 | SCL15246.1 | GA0074694_1117 | GA0074694_1122 | L-glutamine:scyllo-inosose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.571 |
SCL15235.1 | sis16 | GA0074694_1117 | GA0074694_1123 | L-glutamine:scyllo-inosose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. | 0.488 |
SCL15235.1 | sisB | GA0074694_1117 | GA0074694_1118 | L-glutamine:scyllo-inosose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 3-dehydroquinate synthase. | 0.518 |
SCL15239.1 | SCL15235.1 | GA0074694_1119 | GA0074694_1117 | Predicted dehydrogenase. | L-glutamine:scyllo-inosose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.852 |
SCL15239.1 | SCL15241.1 | GA0074694_1119 | GA0074694_1120 | Predicted dehydrogenase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.850 |
SCL15239.1 | SCL15243.1 | GA0074694_1119 | GA0074694_1121 | Predicted dehydrogenase. | Radical SAM superfamily protein. | 0.774 |
SCL15239.1 | SCL15246.1 | GA0074694_1119 | GA0074694_1122 | Predicted dehydrogenase. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.936 |
SCL15239.1 | sis16 | GA0074694_1119 | GA0074694_1123 | Predicted dehydrogenase. | 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. | 0.773 |
SCL15239.1 | sisB | GA0074694_1119 | GA0074694_1118 | Predicted dehydrogenase. | 3-dehydroquinate synthase. | 0.773 |
SCL15241.1 | SCL15235.1 | GA0074694_1120 | GA0074694_1117 | Glycosyltransferase involved in cell wall bisynthesis. | L-glutamine:scyllo-inosose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.615 |
SCL15241.1 | SCL15239.1 | GA0074694_1120 | GA0074694_1119 | Glycosyltransferase involved in cell wall bisynthesis. | Predicted dehydrogenase. | 0.850 |
SCL15241.1 | SCL15243.1 | GA0074694_1120 | GA0074694_1121 | Glycosyltransferase involved in cell wall bisynthesis. | Radical SAM superfamily protein. | 0.773 |
SCL15241.1 | SCL15246.1 | GA0074694_1120 | GA0074694_1122 | Glycosyltransferase involved in cell wall bisynthesis. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.839 |
SCL15241.1 | sis16 | GA0074694_1120 | GA0074694_1123 | Glycosyltransferase involved in cell wall bisynthesis. | 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. | 0.773 |
SCL15241.1 | sisB | GA0074694_1120 | GA0074694_1118 | Glycosyltransferase involved in cell wall bisynthesis. | 3-dehydroquinate synthase. | 0.773 |
SCL15243.1 | SCL14477.1 | GA0074694_1121 | GA0074694_0781 | Radical SAM superfamily protein. | Polyphosphate:nucleotide phosphotransferase, PPK2 family. | 0.497 |
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