Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL15319.1 | SCL15322.1 | GA0074694_1154 | GA0074694_1155 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.961 |
SCL15319.1 | SCL15325.1 | GA0074694_1154 | GA0074694_1156 | ABC-2 type transport system permease protein. | Putative adhesin. | 0.794 |
SCL15319.1 | SCL15328.1 | GA0074694_1154 | GA0074694_1157 | ABC-2 type transport system permease protein. | HicB family protein. | 0.797 |
SCL15322.1 | SCL15319.1 | GA0074694_1155 | GA0074694_1154 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.961 |
SCL15322.1 | SCL15325.1 | GA0074694_1155 | GA0074694_1156 | ABC-2 type transport system ATP-binding protein. | Putative adhesin. | 0.636 |
SCL15322.1 | SCL15328.1 | GA0074694_1155 | GA0074694_1157 | ABC-2 type transport system ATP-binding protein. | HicB family protein. | 0.602 |
SCL15325.1 | SCL15319.1 | GA0074694_1156 | GA0074694_1154 | Putative adhesin. | ABC-2 type transport system permease protein. | 0.794 |
SCL15325.1 | SCL15322.1 | GA0074694_1156 | GA0074694_1155 | Putative adhesin. | ABC-2 type transport system ATP-binding protein. | 0.636 |
SCL15325.1 | SCL15328.1 | GA0074694_1156 | GA0074694_1157 | Putative adhesin. | HicB family protein. | 0.946 |
SCL15325.1 | SCL15329.1 | GA0074694_1156 | GA0074694_1158 | Putative adhesin. | YwiC-like protein. | 0.473 |
SCL15325.1 | SCL29269.1 | GA0074694_1156 | GA0074694_5353 | Putative adhesin. | DNA-binding transcriptional activator of the SARP family. | 0.566 |
SCL15325.1 | SCL30532.1 | GA0074694_1156 | GA0074694_5720 | Putative adhesin. | Uncharacterized hydrophobic domain-containing protein. | 0.529 |
SCL15328.1 | SCL15319.1 | GA0074694_1157 | GA0074694_1154 | HicB family protein. | ABC-2 type transport system permease protein. | 0.797 |
SCL15328.1 | SCL15322.1 | GA0074694_1157 | GA0074694_1155 | HicB family protein. | ABC-2 type transport system ATP-binding protein. | 0.602 |
SCL15328.1 | SCL15325.1 | GA0074694_1157 | GA0074694_1156 | HicB family protein. | Putative adhesin. | 0.946 |
SCL15328.1 | SCL15329.1 | GA0074694_1157 | GA0074694_1158 | HicB family protein. | YwiC-like protein. | 0.514 |
SCL15328.1 | SCL26898.1 | GA0074694_1157 | GA0074694_4652 | HicB family protein. | Regulatory protein, tetR family. | 0.406 |
SCL15328.1 | SCL27705.1 | GA0074694_1157 | GA0074694_4890 | HicB family protein. | Regulatory protein, tetR family. | 0.431 |
SCL15328.1 | SCL29269.1 | GA0074694_1157 | GA0074694_5353 | HicB family protein. | DNA-binding transcriptional activator of the SARP family. | 0.476 |
SCL15328.1 | SCL30532.1 | GA0074694_1157 | GA0074694_5720 | HicB family protein. | Uncharacterized hydrophobic domain-containing protein. | 0.554 |
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