STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL15571.1Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (557 aa)    
Predicted Functional Partners:
SCL15569.1
Uncharacterized membrane protein, DUF485 family.
 
  
 0.995
SCL22016.1
Uncharacterized membrane protein, DUF485 family.
 
  
 0.904
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.606
SCL15574.1
dTDP-glucose 4,6-dehydratase.
       0.549
SCL19140.1
acetoacetyl-CoA synthetase.
  
  
 0.506
SCL27495.1
2-aminobenzoate-CoA ligase.
  
  
 0.506
SCL15567.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
       0.496
SCL15554.1
Na+(or H+)/acetate symporter ActP; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
    
0.456
SCL15564.1
Polyketide cyclase / dehydrase and lipid transport.
       0.415
SCL14471.1
Inorganic phosphate transporter, PiT family.
      
 0.412
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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