STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL16183.1LPXTG-motif cell wall anchor domain-containing protein. (103 aa)    
Predicted Functional Partners:
SCL31728.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.957
SCL15985.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
  0.697
SCL19242.1
Peptidase inhibitor I9; Belongs to the peptidase S8 family.
  
  0.697
SCL25719.1
Regulatory P domain of the subtilisin-like proprotein convertase; Belongs to the peptidase S8 family.
  
  0.697
SCL19397.1
Hypothetical protein.
  
 0.621
SCL19112.1
Hypothetical protein.
    
   0.493
SCL16501.1
LPXTG-motif cell wall anchor domain-containing protein; Belongs to the 5'-nucleotidase family.
    
 0.491
SCL22257.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
    
 0.491
SCL23446.1
Chitinase family 18; Belongs to the glycosyl hydrolase 18 family.
    
  0.490
SCL27699.1
Hypothetical protein.
  
 
 0.458
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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