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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL16388.1Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component. (490 aa)    
Predicted Functional Partners:
SCL13293.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.998
SCL22836.1
2-oxoisovalerate dehydrogenase E1 component.
 
 0.989
SCL23143.1
2-oxoglutarate dehydrogenase E2 component.
 0.977
SCL16671.1
Thiol-disulfide isomerase or thioredoxin.
  
 0.974
SCL14855.1
Thiol-disulfide isomerase or thioredoxin.
   
 0.973
SCL16099.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.968
SCL25380.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.967
SCL27609.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.951
SCL25384.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
 
 0.947
SCL16103.1
Pyruvate dehydrogenase E1 component beta subunit.
 
 0.943
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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