STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL16642.1Hypothetical protein. (59 aa)    
Predicted Functional Partners:
SCL16639.1
TIGR03086 family protein.
       0.773
SCL16644.1
Hypothetical protein.
       0.773
SCL16647.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
       0.773
SCL16650.1
Threonine dehydratase.
       0.504
SCL16625.1
rsbT co-antagonist protein RsbR.
       0.497
SCL16628.1
rsbT antagonist protein RsbS.
       0.497
SCL16630.1
Serine/threonine-protein kinase RsbT.
       0.497
SCL16632.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
       0.497
SCL16635.1
Signal transduction histidine kinase.
       0.497
SCL16637.1
Serine phosphatase RsbU, regulator of sigma subunit.
       0.497
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.