STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL16749.1ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA. (370 aa)    
Predicted Functional Partners:
SCL16752.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
 
 0.999
SCL16754.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
  
  0.998
SCL16757.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 0.998
SCL16756.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
 
 0.997
SCL21998.1
phenylacetate-CoA ligase.
 
 
 0.943
SCL18219.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase.
 
 
  0.920
SCL28975.1
Ferredoxin-NADP reductase.
  
 0.849
SCL27481.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
  0.720
SCL14629.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
  0.666
SCL18221.1
Transcriptional regulator, PaaX family.
 
  
 0.571
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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