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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL17389.1NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. (310 aa)    
Predicted Functional Partners:
SCL32102.1
ABC-type multidrug transport system, ATPase and permease component.
  
  0.980
SCL31021.1
Amino acid adenylation domain-containing protein.
  
  
 0.899
SCL17397.1
Iron complex transport system substrate-binding protein.
 
  
 0.884
SCL17400.1
Iron complex transport system ATP-binding protein.
    0.862
SCL17394.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.858
SCL22007.1
Bifunctional isochorismate lyase / aryl carrier protein.
 
  
 0.784
SCL25274.1
Mycobactin salicyl-AMP ligase.
 
  
 0.693
SCL25279.1
Mycobactin phenyloxazoline synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.511
SCL27811.1
Acyl carrier protein.
  
  
 0.488
SCL31056.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
  
     0.473
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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