STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL17700.1Putative PD-(D/E)XK family member. (328 aa)    
Predicted Functional Partners:
SCL17703.1
Z1 domain-containing protein.
 
  
 0.964
SCL17696.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.953
SCL17692.1
AIPR protein.
 
   
 0.907
SCL17687.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.749
SCL19269.1
Hypothetical protein.
  
     0.692
SCL24346.1
Hypothetical protein.
  
     0.613
SCL19122.1
Hypothetical protein.
  
     0.571
SCL17557.1
Hypothetical protein.
  
     0.511
SCL17684.1
DNA (cytosine-5)-methyltransferase 1.
 
     0.511
SCL14576.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.510
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.