Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCL17751.1Regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family. (849 aa)    
Predicted Functional Partners:
SCL17755.1
AAA domain-containing protein.
 
     0.951
SCL17757.1
Helix-turn-helix domain-containing protein.
 
     0.945
SCL17761.1
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain.
       0.773
SCL27153.1
Hypothetical protein.
 
     0.772
SCL27156.1
Integrase core domain-containing protein.
 
     0.678
SCL17859.1
Integrase core domain-containing protein.
 
     0.568
SCL17764.1
Hypothetical protein.
       0.497
SCL17857.1
AAA domain-containing protein.
  
   0.473
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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