STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL17921.1Amino acid transporter. (482 aa)    
Predicted Functional Partners:
SCL17917.1
Hypothetical protein.
       0.752
SCL12960.1
Alpha-glucosidase.
   
  0.712
SCL13214.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
   
  0.712
SCL18039.1
Starch synthase (maltosyl-transferring).
   
  0.712
SCL18533.1
Alpha-glucosidase.
   
  0.712
SCL18550.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family.
   
  0.712
SCL22604.1
Alpha-amylase.
   
  0.712
SCL24342.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
   
  0.712
glgE
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
   
  0.712
SCL27076.1
GAF domain-containing protein.
  
 
 0.706
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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