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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL18020.1dTDP-D-glucose 4,6-dehydratase. (364 aa)    
Predicted Functional Partners:
SCL30551.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 
 0.988
SCL19124.1
UDPglucose 6-dehydrogenase.
 
 
 0.955
SCL18026.1
CDP-glucose 4,6-dehydratase.
 
 
0.939
SCL29754.1
Hypothetical protein.
  
 
 0.935
SCL19390.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
  
 0.856
SCL30564.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
  
 0.856
SCL23302.1
NDP-sugar pyrophosphorylase, includes eIF-2Bgamma, eIF-2Bepsilon, and LPS biosynthesis proteins.
  
 
 0.848
SCL13626.1
UDPglucose--hexose-1-phosphate uridylyltransferase.
   
 
 0.844
SCL15246.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.821
SCL30542.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.821
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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