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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL18081.1Sugar phosphate permease. (419 aa)    
Predicted Functional Partners:
SCL18082.1
Predicted N-acyltransferase.
       0.773
SCL18086.1
Methyltransferase domain-containing protein.
       0.773
SCL18089.1
2OG-Fe(II) oxygenase superfamily protein.
       0.768
SCL26407.1
iron(III) transport system substrate-binding protein.
  
  
 0.570
SCL31021.1
Amino acid adenylation domain-containing protein.
     
 0.516
SCL18093.1
Biotin carboxylase; Manually curated.
       0.509
SCL13820.1
MFS transporter, NNP family, nitrate/nitrite transporter.
  
 
 0.425
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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