Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL14539.1 | SCL18203.1 | GA0074694_0809 | GA0074694_2274 | Hypothetical protein. | Phosphotransferase enzyme family protein. | 0.651 |
SCL14539.1 | SCL19862.1 | GA0074694_0809 | GA0074694_2838 | Hypothetical protein. | Hypothetical protein. | 0.671 |
SCL14539.1 | SCL23481.1 | GA0074694_0809 | GA0074694_3660 | Hypothetical protein. | Transcriptional regulator, contains XRE-family HTH domain. | 0.673 |
SCL15315.1 | SCL18203.1 | GA0074694_1152 | GA0074694_2274 | Helix-turn-helix domain-containing protein. | Phosphotransferase enzyme family protein. | 0.609 |
SCL15315.1 | SCL19862.1 | GA0074694_1152 | GA0074694_2838 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.727 |
SCL15315.1 | SCL23481.1 | GA0074694_1152 | GA0074694_3660 | Helix-turn-helix domain-containing protein. | Transcriptional regulator, contains XRE-family HTH domain. | 0.726 |
SCL15978.1 | SCL18203.1 | GA0074694_1438 | GA0074694_2274 | Helix-turn-helix domain-containing protein. | Phosphotransferase enzyme family protein. | 0.625 |
SCL15978.1 | SCL19862.1 | GA0074694_1438 | GA0074694_2838 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.726 |
SCL15978.1 | SCL23481.1 | GA0074694_1438 | GA0074694_3660 | Helix-turn-helix domain-containing protein. | Transcriptional regulator, contains XRE-family HTH domain. | 0.707 |
SCL18203.1 | SCL14539.1 | GA0074694_2274 | GA0074694_0809 | Phosphotransferase enzyme family protein. | Hypothetical protein. | 0.651 |
SCL18203.1 | SCL15315.1 | GA0074694_2274 | GA0074694_1152 | Phosphotransferase enzyme family protein. | Helix-turn-helix domain-containing protein. | 0.609 |
SCL18203.1 | SCL15978.1 | GA0074694_2274 | GA0074694_1438 | Phosphotransferase enzyme family protein. | Helix-turn-helix domain-containing protein. | 0.625 |
SCL18203.1 | SCL19862.1 | GA0074694_2274 | GA0074694_2838 | Phosphotransferase enzyme family protein. | Hypothetical protein. | 0.690 |
SCL18203.1 | SCL19911.1 | GA0074694_2274 | GA0074694_2859 | Phosphotransferase enzyme family protein. | Helix-turn-helix domain-containing protein. | 0.608 |
SCL18203.1 | SCL22279.1 | GA0074694_2274 | GA0074694_3316 | Phosphotransferase enzyme family protein. | Helix-turn-helix domain-containing protein. | 0.661 |
SCL18203.1 | SCL23235.1 | GA0074694_2274 | GA0074694_3591 | Phosphotransferase enzyme family protein. | Helix-turn-helix domain-containing protein. | 0.703 |
SCL18203.1 | SCL23481.1 | GA0074694_2274 | GA0074694_3660 | Phosphotransferase enzyme family protein. | Transcriptional regulator, contains XRE-family HTH domain. | 0.604 |
SCL18203.1 | SCL31640.1 | GA0074694_2274 | GA0074694_6041 | Phosphotransferase enzyme family protein. | Helix-turn-helix domain-containing protein. | 0.650 |
SCL18203.1 | SCL32133.1 | GA0074694_2274 | GA0074694_6176 | Phosphotransferase enzyme family protein. | Helix-turn-helix domain-containing protein. | 0.686 |
SCL19862.1 | SCL14539.1 | GA0074694_2838 | GA0074694_0809 | Hypothetical protein. | Hypothetical protein. | 0.671 |
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