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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL18513.1UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (327 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 0.996
SCL13626.1
UDPglucose--hexose-1-phosphate uridylyltransferase.
  
 0.994
SCL18389.1
UTP--glucose-1-phosphate uridylyltransferase.
 
  
 0.963
SCL19124.1
UDPglucose 6-dehydrogenase.
 
 
 0.933
SCL14305.1
UDP-glucose 4-epimerase.
  
 
  0.883
SCL16593.1
Nucleoside-diphosphate-sugar epimerase.
  
 
  0.809
SCL17942.1
Nucleoside-diphosphate-sugar epimerase.
 
 
  0.797
SCL30551.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 
 0.792
SCL15574.1
dTDP-glucose 4,6-dehydratase.
 
 
 
0.765
SCL18020.1
dTDP-D-glucose 4,6-dehydratase.
 
 
0.748
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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