Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL14941.1 | SCL15180.1 | GA0074694_0984 | GA0074694_1090 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Purine-nucleoside phosphorylase. | 0.949 |
SCL14941.1 | SCL16501.1 | GA0074694_0984 | GA0074694_1641 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | LPXTG-motif cell wall anchor domain-containing protein; Belongs to the 5'-nucleotidase family. | 0.948 |
SCL14941.1 | SCL18572.1 | GA0074694_0984 | GA0074694_2398 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Cytidine deaminase. | 0.901 |
SCL14941.1 | SCL18576.1 | GA0074694_0984 | GA0074694_2399 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Thymidine phosphorylase. | 0.891 |
SCL14941.1 | SCL19467.1 | GA0074694_0984 | GA0074694_2696 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Uridine kinase. | 0.885 |
SCL14941.1 | SCL22696.1 | GA0074694_0984 | GA0074694_3434 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 5'-nucleotidase. | 0.898 |
SCL14941.1 | SCL27017.1 | GA0074694_0984 | GA0074694_4685 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Thymidine kinase. | 0.889 |
SCL14941.1 | SCL28652.1 | GA0074694_0984 | GA0074694_5172 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Hypothetical protein. | 0.659 |
SCL15180.1 | SCL14941.1 | GA0074694_1090 | GA0074694_0984 | Purine-nucleoside phosphorylase. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.949 |
SCL15180.1 | SCL16501.1 | GA0074694_1090 | GA0074694_1641 | Purine-nucleoside phosphorylase. | LPXTG-motif cell wall anchor domain-containing protein; Belongs to the 5'-nucleotidase family. | 0.956 |
SCL15180.1 | SCL18572.1 | GA0074694_1090 | GA0074694_2398 | Purine-nucleoside phosphorylase. | Cytidine deaminase. | 0.919 |
SCL15180.1 | SCL18576.1 | GA0074694_1090 | GA0074694_2399 | Purine-nucleoside phosphorylase. | Thymidine phosphorylase. | 0.954 |
SCL15180.1 | SCL18637.1 | GA0074694_1090 | GA0074694_2419 | Purine-nucleoside phosphorylase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. | 0.544 |
SCL15180.1 | SCL19467.1 | GA0074694_1090 | GA0074694_2696 | Purine-nucleoside phosphorylase. | Uridine kinase. | 0.409 |
SCL15180.1 | SCL22696.1 | GA0074694_1090 | GA0074694_3434 | Purine-nucleoside phosphorylase. | 5'-nucleotidase. | 0.883 |
SCL15180.1 | SCL27017.1 | GA0074694_1090 | GA0074694_4685 | Purine-nucleoside phosphorylase. | Thymidine kinase. | 0.915 |
SCL15180.1 | SCL28652.1 | GA0074694_1090 | GA0074694_5172 | Purine-nucleoside phosphorylase. | Hypothetical protein. | 0.409 |
SCL16501.1 | SCL14941.1 | GA0074694_1641 | GA0074694_0984 | LPXTG-motif cell wall anchor domain-containing protein; Belongs to the 5'-nucleotidase family. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.948 |
SCL16501.1 | SCL15180.1 | GA0074694_1641 | GA0074694_1090 | LPXTG-motif cell wall anchor domain-containing protein; Belongs to the 5'-nucleotidase family. | Purine-nucleoside phosphorylase. | 0.956 |
SCL16501.1 | SCL18572.1 | GA0074694_1641 | GA0074694_2398 | LPXTG-motif cell wall anchor domain-containing protein; Belongs to the 5'-nucleotidase family. | Cytidine deaminase. | 0.917 |
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