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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL18787.1Ricin-type beta-trefoil lectin domain-containing protein. (1186 aa)    
Predicted Functional Partners:
SCL26028.1
Hypothetical protein.
 
 
 0.863
SCL23280.1
Cytochrome c oxidase subunit 3.
    
 0.774
SCL23253.1
Cytochrome c oxidase subunit 2.
    
 0.770
SCL31728.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.717
SCL24677.1
Cellulose binding domain-containing protein.
  
  
  0.679
SCL31182.1
Cellulase (glycosyl hydrolase family 5).
  
  
  0.663
SCL13219.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.660
SCL13749.1
Cellulose binding domain-containing protein.
 
 
 0.642
SCL16690.1
Terpene synthase family, metal binding domain.
  
     0.624
SCL23446.1
Chitinase family 18; Belongs to the glycosyl hydrolase 18 family.
  
  
  0.616
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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