Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCL19772.1Lipoprotein-anchoring transpeptidase ErfK/SrfK. (425 aa)    
Predicted Functional Partners:
SCL20029.1
Cobalamin-independent synthase, Catalytic domain; Manually curated.
  
     0.657
SCL14851.1
Colicin V production protein.
  
     0.576
SCL15738.1
Uncharacterized membrane protein.
  
     0.572
SCL19768.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK.
 
    
0.558
SCL22840.1
Protein of unknown function.
  
     0.480
SCL23038.1
Alpha-1,6-mannosyltransferase.
  
     0.447
SCL14787.1
Protein of unknown function.
  
     0.441
SCL13054.1
Protein of unknown function.
  
     0.424
SCL14433.1
Protein of unknown function.
  
     0.407
SCL19775.1
Transposase IS116/IS110/IS902 family protein.
       0.401
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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