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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL19844.1Methyltransferase, FkbM family. (207 aa)    
Predicted Functional Partners:
SCL14224.1
Tetratricopeptide repeat-containing protein.
   
   0.939
SCL19343.1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.936
SCL19853.1
Methyltransferase domain-containing protein.
       0.788
SCL22551.1
Sulfotransferase family protein.
   
   0.774
SCL25798.1
Right handed beta helix region.
   
   0.774
SCL19840.1
Hypothetical protein.
       0.773
SCL19848.1
2'-hydroxyisoflavone reductase.
       0.773
SCL19851.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
       0.773
SCL19857.1
Methionine adenosyltransferase.
       0.773
SCL14212.1
HAMP domain-containing protein.
    
  0.758
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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