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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL21917.1Trypsin. (265 aa)    
Predicted Functional Partners:
SCL16725.1
Proprotein convertase P-domain-containing protein.
 
 0.679
SCL16223.1
Hypothetical protein.
    
  0.619
SCL17471.1
Hypothetical protein.
    
  0.619
SCL26065.1
Hypothetical protein.
    
  0.619
SCL27433.1
Arylformamidase.
   
  0.607
SCL18645.1
Golgi phosphoprotein 3 (GPP34).
  
     0.518
SCL29427.1
Hypothetical protein.
  
     0.500
SCL27759.1
Tat (twin-arginine translocation) pathway signal sequence.
   
 0.498
SCL16076.1
DinB superfamily protein.
    
 0.435
SCL28671.1
Hypothetical protein.
    
 0.435
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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