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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL21966.1Catechol 2,3-dioxygenase. (129 aa)    
Predicted Functional Partners:
SCL21935.1
Regulatory protein, luxR family.
  
    0.546
SCL21969.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
       0.541
SCL21972.1
Hypothetical protein.
       0.541
SCL25875.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
  
  0.538
SCL19232.1
Protein of unknown function.
  
     0.475
SCL21976.1
Signal transduction histidine kinase.
 
     0.439
SCL17726.1
Reverse transcriptase (RNA-dependent DNA polymerase).
  
     0.404
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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