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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL22117.1Hypothetical protein. (293 aa)    
Predicted Functional Partners:
SCL22118.1
Putative Holin-X, holin superfamily III.
 
     0.923
SCL22122.1
Protein of unknown function.
 
     0.923
SCL13824.1
Assimilatory nitrate reductase electron transfer subunit.
  
 0.803
SCL13830.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.803
SCL21836.1
uroporphyrinogen-III C-methyltransferase.
  
  
 0.740
SCL23810.1
Glutamate synthase (NADH) large subunit.
   
 
 0.699
SCL16757.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.684
SCL28975.1
Ferredoxin-NADP reductase.
  
 
 0.684
SCL13298.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.652
SCL14269.1
uroporphyrinogen-III C-methyltransferase.
  
  
 0.652
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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