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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL23186.1Hypothetical protein. (66 aa)    
Predicted Functional Partners:
SCL23189.1
Zn-dependent protease (includes SpoIVFB).
       0.882
SCL15185.1
Putative tRNA adenosine deaminase-associated protein.
  
     0.670
SCL16940.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
     0.663
SCL20329.1
Hypothetical protein.
  
     0.642
SCL31117.1
Streptomyces sporulation and cell division protein, SsgA.
  
     0.629
SCL18334.1
Hypothetical protein.
  
     0.613
SCL16664.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
     0.604
SCL15591.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
     0.598
SCL13295.1
Hypothetical protein.
  
     0.493
SCL23182.1
Transposase.
       0.473
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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