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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nadAQuinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. (398 aa)    
Predicted Functional Partners:
SCL14751.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
 
 0.997
SCL14749.1
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family.
 
 
 0.996
SCL16113.1
8-oxo-dGTP diphosphatase.
  
    0.775
SCL29578.1
Nicotinamide mononucleotide transporter.
  
  
 0.735
SCL13481.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
 
  
 0.721
SCL30716.1
Transferase hexapeptide (six repeat-containing protein).
  
    0.708
SCL30476.1
Succinate dehydrogenase subunit A.
    
 0.684
SCL29642.1
Guanylate kinase.
  
    0.648
SCL23220.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
       0.628
SCL23252.1
Cysteine desulfurase.
 
  
 0.594
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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