close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL23235.1Helix-turn-helix domain-containing protein. (282 aa)    
Predicted Functional Partners:
SCL31614.1
Serine/threonine-protein kinase HipA; Manually curated.
 
 
 
 0.940
SCL23230.1
Protein of unknown function.
 
     0.925
SCL14360.1
TIGR03083 family protein.
   
 
 0.889
SCL26394.1
Helix-turn-helix domain-containing protein.
  
     0.756
SCL15318.1
Protein of unknown function.
  
     0.753
SCL20257.1
Protein of unknown function.
  
     0.744
SCL28918.1
Protein of unknown function.
  
     0.744
SCL22144.1
Protein of unknown function.
  
     0.742
SCL22283.1
Protein of unknown function.
  
     0.732
SCL25768.1
S-adenosyl methyltransferase.
  
     0.719
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.