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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL23247.1tRNA 2-thiouridine synthesizing protein A; Belongs to the sulfur carrier protein TusA family. (95 aa)    
Predicted Functional Partners:
SCL23252.1
Cysteine desulfurase.
 
 
 0.999
SCL20022.1
Cysteine desulfurase.
   
 0.994
SCL14418.1
Predicted peroxiredoxin.
 
  
 0.858
SCL14132.1
Adenylyltransferase and sulfurtransferase.
  
 
 0.850
SCL28411.1
Cysteine synthase.
  
 
 0.815
SCL23253.1
Cytochrome c oxidase subunit 2.
       0.615
SCL23258.1
Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
       0.608
SCL13621.1
Sulfate adenylyltransferase.
 
  
 0.594
SCL23747.1
TIGR03085 family protein.
    
 0.587
SCL13393.1
Bacteriocin biosynthesis cyclodehydratase domain-containing protein.
    
 0.538
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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