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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL23743.1Terpene synthase family, metal binding domain. (316 aa)    
Predicted Functional Partners:
SCL23810.1
Glutamate synthase (NADH) large subunit.
    
 0.804
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.779
SCL30628.1
Terpene synthase family, metal binding domain.
  
     0.734
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.686
SCL18177.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.685
SCL18690.1
IMP dehydrogenase.
    
 0.664
SCL16036.1
Pregnancy-associated plasma protein-A.
  
    0.611
SCL16690.1
Terpene synthase family, metal binding domain.
  
  
 
0.594
SCL23747.1
TIGR03085 family protein.
 
     0.576
SCL18731.1
Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family.
  
     0.572
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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