STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL23753.1ABC-type multidrug transport system, ATPase and permease component. (604 aa)    
Predicted Functional Partners:
SCL32102.1
ABC-type multidrug transport system, ATPase and permease component.
 
 
 
0.865
SCL23749.1
ABC-type multidrug transport system, ATPase and permease component.
 
    
0.838
SCL13668.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 
0.824
SCL30334.1
Acyl transferase domain-containing protein.
  
 0.821
SCL17020.1
Acyl transferase domain-containing protein.
  
 0.819
SCL27811.1
Acyl carrier protein.
  
 0.697
SCL31021.1
Amino acid adenylation domain-containing protein.
  
 
 0.687
SCL24957.1
Acyl carrier protein.
   
 0.650
SCL18262.1
Acyl transferase domain-containing protein.
   
 0.623
SCL25546.1
Acyl transferase domain-containing protein.
   
 0.623
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.