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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL23835.1Choline dehydrogenase. (532 aa)    
Predicted Functional Partners:
SCL23284.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
  
 
 0.944
SCL17440.1
Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.902
SCL16076.1
DinB superfamily protein.
    
 0.881
SCL28671.1
Hypothetical protein.
    
 0.881
SCL25521.1
WD40 repeat.
  
 
  0.846
SCL23263.1
WD40 repeat.
 
 
  0.843
SCL25849.1
WD40 repeat.
 
 
  0.843
SCL28095.1
WD40 repeat.
 
 
  0.841
SCL25845.1
NACHT domain-containing protein.
   
  0.819
SCL15258.1
WD domain-containing protein, G-beta repeat-containing protein.
    
  0.815
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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