Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL13185.1 | SCL16660.1 | GA0074694_0193 | GA0074694_1708 | Histidine kinase. | Signal transduction histidine kinase. | 0.812 |
SCL13185.1 | SCL21976.1 | GA0074694_0193 | GA0074694_3211 | Histidine kinase. | Signal transduction histidine kinase. | 0.675 |
SCL13185.1 | SCL23345.1 | GA0074694_0193 | GA0074694_3621 | Histidine kinase. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.763 |
SCL13185.1 | SCL24936.1 | GA0074694_0193 | GA0074694_4083 | Histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.795 |
SCL13185.1 | SCL24940.1 | GA0074694_0193 | GA0074694_4084 | Histidine kinase. | Signal transduction histidine kinase. | 0.783 |
SCL13185.1 | SCL28509.1 | GA0074694_0193 | GA0074694_5134 | Histidine kinase. | Signal transduction histidine kinase. | 0.809 |
SCL13185.1 | SCL31261.1 | GA0074694_0193 | GA0074694_5930 | Histidine kinase. | Histidine kinase-like ATPase domain-containing protein. | 0.566 |
SCL14279.1 | SCL16660.1 | GA0074694_0696 | GA0074694_1708 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.812 |
SCL14279.1 | SCL21976.1 | GA0074694_0696 | GA0074694_3211 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.554 |
SCL14279.1 | SCL23345.1 | GA0074694_0696 | GA0074694_3621 | Signal transduction histidine kinase. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.540 |
SCL14279.1 | SCL24936.1 | GA0074694_0696 | GA0074694_4083 | Signal transduction histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.846 |
SCL14279.1 | SCL24940.1 | GA0074694_0696 | GA0074694_4084 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.812 |
SCL14279.1 | SCL28509.1 | GA0074694_0696 | GA0074694_5134 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.557 |
SCL14279.1 | SCL31261.1 | GA0074694_0696 | GA0074694_5930 | Signal transduction histidine kinase. | Histidine kinase-like ATPase domain-containing protein. | 0.596 |
SCL16660.1 | SCL13185.1 | GA0074694_1708 | GA0074694_0193 | Signal transduction histidine kinase. | Histidine kinase. | 0.812 |
SCL16660.1 | SCL14279.1 | GA0074694_1708 | GA0074694_0696 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.812 |
SCL16660.1 | SCL21976.1 | GA0074694_1708 | GA0074694_3211 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.812 |
SCL16660.1 | SCL23345.1 | GA0074694_1708 | GA0074694_3621 | Signal transduction histidine kinase. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.812 |
SCL16660.1 | SCL24936.1 | GA0074694_1708 | GA0074694_4083 | Signal transduction histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.893 |
SCL16660.1 | SCL24940.1 | GA0074694_1708 | GA0074694_4084 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.812 |
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