close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL25085.1Amino acid ABC transporter ATP-binding protein, PAAT family. (255 aa)    
Predicted Functional Partners:
SCL25081.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.999
SCL31757.1
Glutamate transport system permease protein.
 
 0.973
SCL31762.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.973
SCL29038.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.963
SCL23900.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.954
SCL26259.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.953
SCL29033.1
Polar amino acid transport system permease protein.
 
  0.924
SCL25076.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
  0.908
SCL31755.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.884
SCL14881.1
Glutamate transport system substrate-binding protein.
 
 0.874
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.