Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SCL25085.1Amino acid ABC transporter ATP-binding protein, PAAT family. (255 aa)    
Predicted Functional Partners:
SCL25081.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.999
SCL31757.1
Glutamate transport system permease protein.
 
 0.959
SCL31762.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.959
SCL29038.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.951
SCL23900.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.949
SCL26259.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.948
SCL29033.1
Polar amino acid transport system permease protein.
 
  0.948
SCL25076.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
  0.880
SCL31755.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.855
SCL14881.1
Glutamate transport system substrate-binding protein.
 
 0.843
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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