STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL25107.14-hydroxyacetophenone monooxygenase. (661 aa)    
Predicted Functional Partners:
atpA
ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
   0.908
SCL27433.1
Arylformamidase.
  
 
 0.812
SCL26716.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
  
 
0.805
SCL27489.1
anthraniloyl-CoA monooxygenase.
  
 0.713
SCL25103.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
   0.705
atpG
ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.699
SCL22660.1
Saccharopine dehydrogenase (NAD+, L-glutamate forming).
  
   
 0.636
SCL16382.1
CubicO group peptidase, beta-lactamase class C family.
  
  
  0.622
SCL31014.1
Cytochrome P450.
  
  0.564
SCL30334.1
Acyl transferase domain-containing protein.
  
 
 0.558
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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