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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL25724.1Dipeptidase E; Belongs to the peptidase S51 family. (246 aa)    
Predicted Functional Partners:
SCL25728.1
DNA-binding transcriptional regulator, IclR family.
 
     0.697
SCL25746.1
Protein of unknown function.
 
     0.586
SCL25754.1
Protein AroM.
 
     0.528
SCL25731.1
Peptide/nickel transport system permease protein.
 
     0.518
SCL25739.1
Peptide/nickel transport system substrate-binding protein.
 
     0.469
SCL25735.1
Peptide/nickel transport system permease protein.
       0.433
Your Current Organism:
Micromonospora inyonensis
NCBI taxonomy Id: 47866
Other names: ATCC 27600, DSM 46123, JCM 3188, M. inyonensis, Micromonospora inyoensis, Micromonospora inyonensis Kroppenstedt et al. 2005, NBRC 13156, NRRL 3292
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